Imputation of missing genotypes from sparse to high density using long-range phasing

Imputation of missing genotypes from sparse to high density using long-range phasing

Daetwyler, Hans D., Wiggans, George R., Hayes, Ben J., Woolliams, John A. and Goddard, Mike E. (2011). Genetics, 189 (1), 317-327. doi: /genetics.82

Williams, Y. J., Pryce, J. E., Grainger, C., Wales, W. J., Linden, N., Porker, M. and Hayes, B. J. (2011). Variation in residual feed intake in Holstein-Friesian dairy heifers in southern Australia. Journal of Dairy Science, 94 (9), 4715-4725. doi: /jds.2010-4015

Sodeland, Marte, Grove, Harald, Kent, Matthew, Taylor, Simon, Svendsen, Morten, Hayes, Ben J. and Lien, Sigbjorn (2011). Molecular characterization of a long range haplotype affecting protein yield and mastitis susceptibility in Norwegian Red cattle. BMC Genetics, 12 70. doi: -2156-12-70

Krishna, Gopal, Gopikrishna, Gopalapillay, Gopal, Chavali, Jahageerdar, Shrinivas, Ravichandran, Pitchaiyappan, Kannappan, Sudalyandi, Pillai, Subramaniapillai M., Paulpandi, Sivagnanam, Kiran, Remanibhaskaran P., Saraswati, Ramamoorthy, Venugopal, Gundaboena, Kumar, Dilip, Gitterle, Thomas, Lozano, Carlos, Rye, Morten and Hayes, Ben (2011). Genetic parameters for growth and survival in Penaeus monodon cultured in India. Aquaculture, 318 (1-2), 74-78. doi: /j.aquaculture.

Gopikrishna, G., Gopal, C., Krishna, G., Jahageerdar, S., Rye, M., Lozano, C., Gitterle, T., Venugopal, G., Paulpandi, S., Ravichandran, P., Pillai, S. M., Ponniah, A. G. and Hayes, B. (2011). Effect of stocking density, water exchange rate and tank substrate on growth and survival of post-larvae of Penaeus monodon (Fabricius, 1798). Indian Journal of Fisheries, 58 (3), 57-61.

Qanbari, Saber, Gianola, Daniel, Hayes, Ben, Schenkel, Flavio, Miller, Steve, Moore, Stephen, Thaller, Georg and Simianer, Henner (2011). Application of site and haplotype-frequency based approaches for detecting selection signatures in cattle. BMC Genomics, 12 (1) 318. doi: -2164-12-318

Pryce, J. , Bolormaa, S., Bowman, P. J., Egger-Danner, C., Fuerst, C., Emmerling, R., Soelkner, J., Goddard, M. E. and Hayes, B. J. (2011). Short communication: Genomic selection using a multi-breed, across-country reference population. Journal of Dairy Science, 94 (5), 2625-2630. doi: /jds.2010-3719

Hayes, B. J. (2011). Technical note: Efficient parentage assignment and pedigree reconstruction with dense single nucleotide polymorphism data. Journal of Dairy Science, 94 (4), 2114-2117. doi: /jds.2010-3896

Pryce, Jennie E., Hayes, Ben J., Bolormaa, Sunduimijid and Goddard, Michael E. (2011). Polymorphic regions affecting human height also control stature in cattle. Genetics, 187 (3), 981-984. doi: /genetics.43

Gidskehaug, Lars, Kent, Matthew, Hayes, Ben J. and Lien, Sigbjorn (2011). Genotype calling and mapping of multisite variants using an Atlantic salmon iSelect SNP array. Bioinformatics, 27 (3) btq673, 303-310. doi: /bioinformatics/btq673

Sodeland, Marte, Kent, Matthew, Hayes, Ben J., Grove, Harald and Lien, Sigbjorn (2011). Recent and historical recombination in the admixed Norwegian Red cattle breed. BMC Genomics, 12 (1) 33. doi: -2164-12-33

Kemper, Kathryn E., Emery, David L., Bishop, Stephen C., Oddy, Hutton, Hayes, Benjamin J., Dominik, Sonja, Henshall, John M. and Goddard, Michael E. (2011). The distribution of SNP marker effects for faecal worm egg count in sheep, and the feasibility of using these markers to predict genetic merit for resistance to worm infections. Genetics Research, 93 (3), 203-219. doi: /S0016672311000097

Goddard, Michael E., Hayes, Ben J. and Meuwissen, Theo H. E. (2010). Genomic selection in livestock populations. Genetics Research, 92 (5-6), 413-421. doi: /S0016672310000613

E., Gredler, B

D., Hickey, J. M., Henshall, J. M., Dominik, S., Gredler, B., van der Werf, J. H. J. and Hayes, B. J. (2010). Accuracy of estimated genomic breeding values for wool and meat traits in a multi-breed sheep population. Animal Production Science, 50 (12), 1004-1010. doi: /AN10096

Daetwyler, H

Pryce, J. E., Goddard, M. E., Raadsma, H. W. and Hayes, B. J. (2010). Deterministic models of breeding scheme designs that incorporate genomic selection. Journal of Dairy Science, 93 (11), 5455-5466. doi: /jds.2010-3256

Moser, Gerhard, Khatkar, Mehar S., Hayes, Ben J. and Raadsma, Herman W. (2010). Accuracy of direct genomic values in Holstein bulls and cows using subsets of SNP markers. Genetics Selection Evolution, 42 (1) 37, 37.1-. doi: -9686-42-37

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